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Doom, of course, has his own electrokinetic powers along with the powers of
Reed Richards
The Thing
Invisible Woman
Human Torch

The composite consists of
Azazel
Cyclops
Storm
Iceman
Collosus
Magneto

Deathmatch in Times Square
Both sides are bloodlusted and Doom will go supernova if he has to. Likewise, the X-Man will be just as bloodlusted.
X-Man can not use magnetokinesis to manipulate Doom directly (although considering he'd be composed of the material Reed is, I'm not sure if it would apply anyway)

Who is the victor?

A teleporting Magneto is a pain.
Though a Doom with Reed's elastic physiology and Thing's strength isn't going to be compromised easily.
Especially when Doom attempts bubbles in the brain wherever the X-man appears.
Though the X-man can teleport anywhere and out of Doom's field of vision. Doom can only bubble what he can see.

The X-man should win this. Azazel combined Magneto ability ensures it.

And in the case of a Supernova? The comic version only had so much distance and we don't have any evidence of the lengths the film version could grow to.

X-men win.

All Doom really needs is Sue's powers and he should win. Teleportation will mean nothing if he creates a personal force field so small that the X-Man can't fit inside. Doom's already showed the ability to plow holes through individuals with his electricity blasts.

Human Torch>>>Iceman
Thing>>>Colossus
Sue's powers counteract everyone else. Reed's elasticity is irrelevant but I guess it gives him longer reach. He already has a durability upgrade from Thing.

Not to mention even this piss poor portrayal of Doom should be VASTLY more intelligent than anyone on that X-Men roster.

It's a shame magnetism doesn't work on this Doom.