RAFT was the new prison for superpowered villains, made in cement, and titanium reinforced with adamantium.
Surveillance made of high level S.H.I.E.L.D. Agents plus superpowered S.H.I.E.L.D. Agents, but Electro was able to assault it like it was an high school which was protected from a 20 years old dog.
Nefaria escaped and blasted Spider-Man with an energy bolt, then flew away.Tough considering without ionic resources to tap into his power levels are very low, he was lucky there weren't major level heroes at the RAFT.