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The Trade federation would have conquered Naboo and Palpatine would have risen to power even sooner. Dooku would become his true apprentice due to the death of Anakin and Maul and per quotes would surpass Yoda in power.

"Dooku was a unique case in the history of the Jedi Order. Universally respected, he would have been a Master on a par with Yoda had he not abandoned the Order to join its greatest enemies." - Insider 113.