I think if Batman were alloted regrouping time he'd figure something out. He could possibly figure out how to advance the stages of Cable's virus. Batman is a master at mental Judo; can turn a weakness or a strength to his advantage.
Although Cable is as tough assed as they come i wanted to mix up the general consensus on the argument.
never count the bat out
Cable will just freeze Batman's brain and tie him up and slowly Cut his Head Off with the use of a kitchen knife.
In terms of strength= Cable wins this again
Fighting Ability= Cable wins this again because he's been fighting since he was a child.
Gadgets= Cable wins this again because he has a time machine.