sincolegio
First time I saw the movie I thought qui gon was S.D but by reading all this I think It´s very possible what you are saiyng.
But another theory I´ve made is that Qui Gon (who died 10 years before)ask for the clones buet ¿where did he take the money from?
I think that as he knew that there was corruption at the senatehe ask for money to palpatine, who accepted because: chancellor=emperor//republic=empire.
But when the war arrived and he knew that the clones were going to fight agains him he eraised kamino from the archives.