I look at it like the Agents are a filter.
If someone who is not the One enters the source, it causes a problem and might destroy the Matrix. In order to make sure he/she is the One, the Agents must put the person through a series of tests. If they are not the One, they die. If they are the One, they live. Then, they may enter the source.
__________________ The past is over. The future a lump of clay. Get dirty and mold it.
Also, The Oracle never stated that Neo wasn't The One. He says something like "So I'm not The One?" and she replies "I'm sorry, maybe in another life", possibly meaning that she's sorry that he is the one.
__________________ "The MTV Movie Awards are a systemic anomaly inherent to the programming of the Matrix. Although the transport process has altered your consciousness, you irrevocably remain human. Ergo, concordantly, vis-a-vis... You know what? I have no idea what the hell I'm saying. I just thought it would make me sound cool."
-The Architect AKA Larry
Maybe Neo could revive Trinity because of their special connection. I have a question how come when Trinity or Morpheus asks him questions about who told him things he evades?
__________________ Oracle: You're cuter than I thought. I can see why she likes you.
Neo: Who?
Oracle: Not too bright, though.
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he doesnt really evade. i dont think he had time to get into.. he was prolly so upset about it he didnt even want too... and its not like he just went poof ur alive trinity.. he took the bullet out
Neo probably just restarted her heart and rewrote the coding so that there was no wound.
__________________ "The MTV Movie Awards are a systemic anomaly inherent to the programming of the Matrix. Although the transport process has altered your consciousness, you irrevocably remain human. Ergo, concordantly, vis-a-vis... You know what? I have no idea what the hell I'm saying. I just thought it would make me sound cool."
-The Architect AKA Larry
Here's another hole. How do all the Agent Smiths get into the backdoor hallway without any keys? Throughout the movie, it's shown that a key is needed, but they don't have any.
__________________ "The MTV Movie Awards are a systemic anomaly inherent to the programming of the Matrix. Although the transport process has altered your consciousness, you irrevocably remain human. Ergo, concordantly, vis-a-vis... You know what? I have no idea what the hell I'm saying. I just thought it would make me sound cool."
-The Architect AKA Larry
__________________ "The MTV Movie Awards are a systemic anomaly inherent to the programming of the Matrix. Although the transport process has altered your consciousness, you irrevocably remain human. Ergo, concordantly, vis-a-vis... You know what? I have no idea what the hell I'm saying. I just thought it would make me sound cool."
-The Architect AKA Larry